immcantation/lab:devel

Machine learning & AI

Data science

Manifest digest

sha256:ec353e8458f9267593756ba3ed20ccc1951c7ee46ffebb072025d4cf6a83753c

OS/ARCH

linux/amd64

Compressed size

3.2 GB

Last pushed

9 days by immcantation

Type

Image

Manifest digest

sha256:ec353e8458f9267593756ba3ed20ccc1951c7ee46ffebb072025d4cf6a83753c

Image Layers

Image Layers

1LABEL maintainer=Clement Verna <[email protected]>0 B

2ENV DISTTAG=f44container FGC=f44 FBR=f440 B

3ADD fedora-20260826.tar / # buildkit66.18 MB

4CMD ["/bin/bash"]0 B

5LABEL maintainer=Jason Anthony Vander Heiden0 B

6VOLUME [/data]0 B

7VOLUME [/scratch]0 B

8VOLUME [/software]0 B

9VOLUME [/oasis]0 B

10COPY tools/versions.py /usr/local/bin/versions # buildkit3.28 KB

11COPY tools/builds.py /usr/local/bin/builds # buildkit1.43 KB

12COPY tools/pipelines.py /usr/local/bin/pipelines # buildkit1.26 KB

13COPY tools/rinstall.R /usr/local/bin/rinstall # buildkit802 B

14RUN /bin/sh -c (cd /etc/yum.repos.d;797 B

15RUN /bin/sh -c dnf -y1.66 GB

16ENV LD_LIBRARY_PATH=/usr/lib64/R/lib:/usr/lib64/atlas0 B

17ENV TAR=internal0 B

18RUN /bin/sh -c update-alternatives --install304 B

19ARG R_REPO=https://cloud.r-project.org/0 B

20ARG R_DEPS=c('BiocManager', 0 B

21ARG R_BIOC_DEPS=c('Biostrings', 0 B

22RUN |3 R_REPO=https://cloud.r-project.org/ R_DEPS=c('BiocManager', 3.33 KB

23RUN |3 R_REPO=https://cloud.r-project.org/ R_DEPS=c('BiocManager', 83.15 MB

24RUN |3 R_REPO=https://cloud.r-project.org/ R_DEPS=c('BiocManager', 4.55 MB

25RUN |3 R_REPO=https://cloud.r-project.org/ R_DEPS=c('BiocManager', 50.96 MB

26RUN |3 R_REPO=https://cloud.r-project.org/ R_DEPS=c('BiocManager', 122.57 MB

27RUN |3 R_REPO=https://cloud.r-project.org/ R_DEPS=c('BiocManager', 214 B

28LABEL maintainer=Jason Anthony Vander Heiden0 B

29ARG BASE_TAG0 B

30COPY Version.yaml /Version.yaml # buildkit392 B

31COPY Pipeline.yaml /Pipeline.yaml # buildkit476 B

32RUN |1 BASE_TAG=devel /bin/sh -c161 B

33RUN |1 BASE_TAG=devel /bin/sh -c31.4 KB

34RUN |1 BASE_TAG=devel /bin/sh -c578.96 KB

35RUN |1 BASE_TAG=devel /bin/sh -c232.96 KB

36RUN |1 BASE_TAG=devel /bin/sh -c488.85 KB

37RUN |1 BASE_TAG=devel /bin/sh -c291.69 MB

38RUN |1 BASE_TAG=devel /bin/sh -c45.82 MB

39RUN |1 BASE_TAG=devel /bin/sh -c4.31 MB

40RUN |1 BASE_TAG=devel /bin/sh -c4 MB

41RUN |1 BASE_TAG=devel /bin/sh -c5.25 MB

42RUN |1 BASE_TAG=devel /bin/sh -c21.43 MB

43RUN |1 BASE_TAG=devel /bin/sh -c470 KB

44RUN |1 BASE_TAG=devel /bin/sh -c427.65 KB

45RUN |1 BASE_TAG=devel /bin/sh -c186.04 MB

46RUN |1 BASE_TAG=devel /bin/sh -c16.61 MB

47RUN |1 BASE_TAG=devel /bin/sh -c19.17 MB

48RUN |1 BASE_TAG=devel /bin/sh -c19.05 MB

49RUN |1 BASE_TAG=devel /bin/sh -c23.45 MB

50RUN |1 BASE_TAG=devel /bin/sh -c40.12 MB

51RUN |1 BASE_TAG=devel /bin/sh -c16.07 MB

52RUN |1 BASE_TAG=devel /bin/sh -c7.26 MB

53RUN |1 BASE_TAG=devel /bin/sh -c19.63 MB

54RUN |1 BASE_TAG=devel /bin/sh -c7.99 MB

55RUN |1 BASE_TAG=devel /bin/sh -c4.03 MB

56RUN |1 BASE_TAG=devel /bin/sh -c75.6 MB

57RUN |1 BASE_TAG=devel /bin/sh -c149.58 KB

58RUN |1 BASE_TAG=devel /bin/sh -c1.37 MB

59ARG IGBLAST_PATCH_URL=https://ftp.ncbi.nih.gov/blast/executables/igblast/release/patch0 B

60RUN |2 BASE_TAG=devel IGBLAST_PATCH_URL=https://ftp.ncbi.nih.gov/blast/executables/igblast/release/patch /bin/sh8.58 KB

61ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/share/igphyml/src0 B

62RUN |2 BASE_TAG=devel IGBLAST_PATCH_URL=https://ftp.ncbi.nih.gov/blast/executables/igblast/release/patch /bin/sh1.8 KB

63CMD ["/bin/sh" "-c" "[\"echo\", 0 B

64LABEL maintainer=Susanna Marquez [[email protected]] description=Immcantation0 B

65ARG BASE_TAG0 B

66ARG RS_USER0 B

67ARG UID0 B

68ARG GID0 B

69ENV RS_USER=magus0 B

70USER magus0 B

71RUN |4 BASE_TAG=devel RS_USER=magus UID=1000266 B

72USER root0 B

73RUN |4 BASE_TAG=devel RS_USER=magus UID=100090 B

74RUN |4 BASE_TAG=devel RS_USER=magus UID=100023.16 MB

75RUN |4 BASE_TAG=devel RS_USER=magus UID=1000211.03 MB

76ARG R_REPO=https://cloud.r-project.org/0 B

77ARG R_DEPS=c('readxl', 0 B

78RUN |6 BASE_TAG=devel RS_USER=magus UID=10006.68 MB

79RUN |6 BASE_TAG=devel RS_USER=magus UID=1000192 B

80RUN |6 BASE_TAG=devel RS_USER=magus UID=10001.4 KB

81RUN |6 BASE_TAG=devel RS_USER=magus UID=1000859 B

82COPY rstudio-server.sh /usr/bin/rstudio-server.sh # buildkit365 B

83COPY run-rstudio.sh /usr/bin/run-rstudio.sh # buildkit193 B

84RUN |6 BASE_TAG=devel RS_USER=magus UID=1000206 B

85RUN |6 BASE_TAG=devel RS_USER=magus UID=1000378 B

86RUN |6 BASE_TAG=devel RS_USER=magus UID=1000189 B

87RUN |6 BASE_TAG=devel RS_USER=magus UID=100092 B

88RUN |6 BASE_TAG=devel RS_USER=magus UID=10002.17 MB

89ENV HOME=/home/magus0 B

90ENV NB_USER=magus0 B

91RUN |6 BASE_TAG=devel RS_USER=magus UID=1000257 B

92RUN |6 BASE_TAG=devel RS_USER=magus UID=100046.66 MB

93RUN |6 BASE_TAG=devel RS_USER=magus UID=10005.16 MB

94RUN |6 BASE_TAG=devel RS_USER=magus UID=100021.75 MB

95RUN |6 BASE_TAG=devel RS_USER=magus UID=100073.57 MB

96RUN |6 BASE_TAG=devel RS_USER=magus UID=100044.8 MB

97VOLUME [/home/magus/results]0 B

98ENV PASSWORD=rstudio0 B

99CMD ["/usr/bin/run-rstudio.sh"]0 B

Command

LABEL maintainer=Clement Verna <[email protected]>