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kapsakcj/seqsero2:1.3.1

Manifest digest

sha256:a6f261ef9d7df9e176af3ae4ba5965e917b8246681cf82e47f11a9d4f9ef4df8

OS/ARCH

linux/amd64

Compressed size

477.58 MB

Last pushed

over 2 years by kapsakcj

Type

Image

Manifest digest

sha256:a6f261ef9d7df9e176af3ae4ba5965e917b8246681cf82e47f11a9d4f9ef4df8

Image Layers

Image Layers

1ADD file ... in / 25.47 MB
2CMD ["bash"]0 B
3ARG SEQSERO2_VER=1.3.10 B
4ARG SPADES_VER=3.15.50 B
5ARG SAMTOOLS_VER=1.80 B
6ARG SALMID_VER=0.110 B
7LABEL base.image=ubuntu:bionic0 B
8LABEL dockerfile.version=10 B
9LABEL software=SeqSero20 B
10LABEL software.version=1.3.10 B
11LABEL description=Salmonella serotyping from genome0 B
12LABEL website=https://github.com/denglab/SeqSero20 B
13LABEL license=https://github.com/denglab/SeqSero2/blob/master/LICENSE0 B
14LABEL maintainer=Erin Young0 B
15LABEL [email protected]0 B
16LABEL maintainer1=Jake Garfin0 B
17LABEL [email protected]0 B
18LABEL maintainer2=Curtis Kapsak0 B
19LABEL [email protected]0 B
20LABEL maintainer3=Kelsey Florek0 B
21LABEL [email protected]0 B
22RUN |4 SEQSERO2_VER=1.3.1 SPADES_VER=3.15.5 SAMTOOLS_VER=1.8131.37 MB
23RUN |4 SEQSERO2_VER=1.3.1 SPADES_VER=3.15.5 SAMTOOLS_VER=1.81.86 MB
24RUN |4 SEQSERO2_VER=1.3.1 SPADES_VER=3.15.5 SAMTOOLS_VER=1.82.64 MB
25RUN |4 SEQSERO2_VER=1.3.1 SPADES_VER=3.15.5 SAMTOOLS_VER=1.824.44 MB
26RUN |4 SEQSERO2_VER=1.3.1 SPADES_VER=3.15.5 SAMTOOLS_VER=1.856.66 MB
27ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/SPAdes-3.15.5-Linux/bin:/SalmID-0.11:/samtools-1.8 LC_ALL=C0 B
28CMD ["/bin/sh" "-c" "SeqSero2_package.py --help"]0 B
29WORKDIR /data32 B
30WORKDIR /test94 B
31RUN /bin/sh -c wget -q9.82 MB
32ARG GENBANK_ACCESSION=GCA_007765495.10 B
33RUN |1 GENBANK_ACCESSION=GCA_007765495.1 /bin/sh -c1.36 MB
34RUN |1 GENBANK_ACCESSION=GCA_007765495.1 /bin/sh -c223.95 MB
35RUN |1 GENBANK_ACCESSION=GCA_007765495.1 /bin/sh -c32 B

Command

ADD file:0eb7f0555d03ff4f0755bba2c3d133e68737888f41390c17710f64b70c8e662a in /