peresay/selectset:v1

Manifest digest

sha256:6be06042466b166cd89db5f2e7488d72dd0667d9db8e5018f816f8f93f879065

OS/ARCH

linux/amd64

Compressed size

1.41 GB

Last pushed

about 5 years by peresay

Type

Image

Manifest digest

sha256:6be06042466b166cd89db5f2e7488d72dd0667d9db8e5018f816f8f93f879065

Image Layers

Image Layers

1LABEL maintainer=Clement Verna <[email protected]>0 B

2ENV DISTTAG=f31container FGC=f31 FBR=f310 B

3ADD file ... in / 58.58 MB

4CMD ["/bin/bash"]0 B

5LABEL maintainer=Jason Anthony Vander0 B

6VOLUME [/data]0 B

7VOLUME [/scratch]0 B

8VOLUME [/software]0 B

9VOLUME [/oasis]0 B

10COPY file:9452c203bae153fa936ff4d476c441b74ff3bc553f878448ecf3b9f5094e18f3 in /usr/local/bin/versions 3.04 KB

11COPY file:06acb9c5514b9bd9b628f2e5336fa4c90366a7ecd753984e24bf76ccd361731c in /usr/local/bin/builds 1.43 KB

12COPY file:74f8dceb7f8566db153be6f8ed9316fd6716cefab1372cc964e297da713e6308 in /usr/local/bin/pipelines 1.26 KB

13COPY file:26437693504a9a4e55bcf517d3a8f7290dd3275fc2322b33a202ee4ec08c16a1 in /usr/local/bin/rinstall 598 B

14/bin/sh -c (cd /etc/yum.repos.d; sed1.06 KB

15/bin/sh -c dnf -y update688.19 MB

16ENV LD_LIBRARY_PATH=/usr/lib64/R/lib:/usr/lib64/atlas0 B

17ARG R_REPO=http://lib.stat.cmu.edu/R/CRAN/0 B

18ARG R_DEPS=c('Rcpp', 0 B

19|2 R_DEPS=c('Rcpp', 51.89 MB

20LABEL maintainer=Jason Anthony Vander0 B

21COPY file:46a128de5c6f7dc700504a7f2d83ac04d30e6166ba4ee6f9be5eb134dc31932b in /Version.yaml 323 B

22COPY file:3345da6290409964f7aa0c3effdcdd556e3d83695110560534891a301a9053dd in /Pipeline.yaml 358 B

23/bin/sh -c builds write -n136 B

24/bin/sh -c PACKAGE="immcantation" 23.7 KB

25/bin/sh -c MUSCLE=$(versions get -n578.75 KB

26/bin/sh -c VSEARCH=$(versions get -n650.73 KB

27/bin/sh -c CDHIT=$(versions get -n437.63 KB

28/bin/sh -c BLAST=$(versions get -n239.38 MB

29/bin/sh -c IGBLAST=$(versions get -n39.04 MB

30/bin/sh -c PHYLIP=$(versions get -n4.31 MB

31/bin/sh -c wget -q --show-progress5.24 MB

32/bin/sh -c AIRR_PY=$(versions get -n7 MB

33/bin/sh -c PACKAGE="presto" 126.23 KB

34/bin/sh -c PACKAGE="changeo" 175.45 KB

35/bin/sh -c PACKAGE="alakazam" 44.05 MB

36/bin/sh -c PACKAGE="shazam" 3.98 MB

37/bin/sh -c PACKAGE="tigger" 5.39 MB

38/bin/sh -c PACKAGE="scoper" 3.56 MB

39/bin/sh -c PACKAGE="prestor" 1.29 MB

40/bin/sh -c IGPHYML=$(versions get -n7.11 MB

41/bin/sh -c PACKAGE="rdi" 2.61 MB

42/bin/sh -c RABHIT=$(versions get -n14.49 MB

43/bin/sh -c fetch_imgtdb.sh -o /usr/local/share/germlines/imgt501.64 KB

44ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/share/igphyml/src0 B

45/bin/sh -c useradd magus -u2.57 KB

46CMD ["/bin/sh" "-c" "echo0 B

47/bin/sh -c yum -y update265.58 MB

48/bin/sh -c git clone http://github.com/neufeld/pandaseq.git/4.6 MB

49COPY file:399d19f1adcbc628c508b9bc6c6e575374068008d81432069e46fe5160502f81 in /pipeline_add.yaml 378 B

50COPY file:ff92c405c2e2a9fd2e8c8c7a0efc19769344db856f3cfa61b2331383ce493ab5 in /Version.yaml 329 B

51COPY file:0f3ec3ab098069f0212c985bc8813cca2772cf1eb0acfc7745c3c0d44b97237c in /usr/local/bin/SelectSet 1.66 KB

52COPY file:6a4abc37a560407fae1d6f24ec855ef3e832655f30dabdd273b49a4b05f0794e in /usr/local/bin/filter_selectset_blastn.py 1.47 KB

53COPY file:74c877e11b3ebec64bfa152d72fa99d0e04801cfb5f0499c7b7d963798c779dc in /usr/local/bin/pipelines 1.29 KB

54COPY file:d65a9e9e358546ebf1b1eb23f45a8abfb38d0c5a66dd8e27e2dfc3d71d09c91f in /usr/local/bin/builds 1.42 KB

55COPY file:452e34e020f1e0b9df609e59b09105d5400a4381858479aa42f6d63c0ec1b345 in /usr/local/bin/versions 3.09 KB

56/bin/sh -c builds write -n231 B

57/bin/sh -c chmod +x "/usr/local/bin/SelectSet"1.66 KB

58CMD ["/bin/sh" "-c" "echo0 B

Command

 LABEL maintainer=Clement Verna <[email protected]>