pipecraft/nextits:1.0.0

Index digest

sha256:dc81bf3ab33871816a155cc6a6bdb465fe429573b36aba2c4dab9ac7a728066d

OS/ARCH

linux/amd64

Compressed size

2.19 GB

Last pushed

over 1 year by metsoja

Type

Image

Manifest digest

sha256:e459edae32d18f0e5f5f34ab1ec210b139c2a3537933ed8b17a42ce8f34dfe6c

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=24.040 B

5ADD file ... in / 28.38 MB

6CMD ["/bin/bash"]0 B

7ENV R_VERSION=4.4.20 B

8ENV R_HOME=/usr/local/lib/R0 B

9ENV TZ=Etc/UTC0 B

10COPY scripts/install_R_source.sh /rocker_scripts/install_R_source.sh # buildkit1.81 KB

11RUN /bin/sh -c /rocker_scripts/install_R_source.sh #296.09 MB

12ENV CRAN=https://p3m.dev/cran/__linux__/noble/2025-02-270 B

13ENV LANG=en_US.UTF-80 B

14COPY scripts/bin/ /rocker_scripts/bin/ # buildkit2.76 KB

15COPY scripts/setup_R.sh /rocker_scripts/setup_R.sh # buildkit1.5 KB

16RUN /bin/sh -c if grep27.17 MB

17CMD ["R"]0 B

18COPY scripts /rocker_scripts # buildkit24.11 KB

19ENV LANG=C.UTF-80 B

20ENV LC_ALL=C.UTF-80 B

21ENV SHELL=/bin/bash0 B

22ENV CONDA_PREFIX=/opt/software/conda0 B

23ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/software/conda/bin/0 B

24LABEL [email protected]0 B

25LABEL org.opencontainers.image.version=0.8.20 B

26RUN /bin/sh -c apt-get update31.23 MB

27RUN /bin/sh -c install2.r --error150.25 MB

28RUN /bin/sh -c R -e200.64 MB

29RUN /bin/sh -c mkdir -p670.9 MB

30RUN /bin/sh -c ${CONDA_PREFIX}/bin/mamba install796.51 MB

31RUN /bin/sh -c cd /opt/software8.01 MB

32RUN /bin/sh -c git clone18.28 KB

33RUN /bin/sh -c wget https://github.com/shenwei356/rush/releases/download/v0.5.4/rush_linux_amd64.tar.gz2.92 MB

34RUN /bin/sh -c wget https://github.com/shenwei356/brename/releases/download/v2.14.0/brename_linux_amd64.tar.gz3.06 MB

35RUN /bin/sh -c git clone94.49 KB

36COPY /usr/local/cargo/bin/runiq /opt/software/conda/bin/runiq # buildkit1.23 MB

37COPY /usr/local/cargo/bin/sd /opt/software/conda/bin/sd # buildkit1000.78 KB

38COPY /usr/local/bin/nextflow /usr/local/bin/nextflow # buildkit6.24 KB

39RUN /bin/sh -c cd /opt/software4.86 MB

40RUN /bin/sh -c cd /opt/software16.84 MB

41WORKDIR /opt/software32 B

Command

 ARG RELEASE