staphb/ivar:1.1-SC2

Manifest digest

sha256:85eb6ece526a5b0e8d6636a15690ddd87b98408d2b3d4efbd1ea59cdfc8b5e18

OS/ARCH

linux/amd64

Compressed size

381.12 MB

Last pushed

over 6 years by staphb

Type

Image

Manifest digest

sha256:85eb6ece526a5b0e8d6636a15690ddd87b98408d2b3d4efbd1ea59cdfc8b5e18

Image Layers

1ADD file ... in / 25.45 MB

2/bin/sh -c [ -z "$(apt-get34.54 KB

3/bin/sh -c set -xe &&847 B

4/bin/sh -c mkdir -p /run/systemd161 B

5CMD ["/bin/bash"]0 B

6LABEL base.image=ubuntu:18.040 B

7LABEL container.version=1.1-SC20 B

8LABEL sc2=Modified from the0 B

9LABEL software=iVar0 B

10LABEL software.version=1.1-PR0 B

11LABEL comments=Clone of ivar0 B

12LABEL description=Computational package that0 B

13LABEL website=https://github.com/andersen-lab/ivar0 B

14LABEL license=https://github.com/andersen-lab/ivar/blob/master/LICENSE0 B

15LABEL maintainer=Kevin Libuit0 B

16LABEL [email protected]0 B

17/bin/sh -c apt-get update20.09 MB

18/bin/sh -c apt-get install -y184.1 MB

19/bin/sh -c git clone -n12.15 MB

20/bin/sh -c mkdir reference &&12.12 KB

21/bin/sh -c mkdir seqtk &&188.72 KB

22/bin/sh -c wget https://github.com/lh3/minimap2/releases/download/v2.17/minimap2-2.17_x64-linux.tar.bz2 &&2.19 MB

23/bin/sh -c cd root/ &&23.54 MB

24ENV LD_LIBRARY_PATH=/usr/local/lib:0 B

25/bin/sh -c cd root &&20.45 MB

26/bin/sh -c cd root/ &&16.71 MB

27/bin/sh -c mkdir bwa &&1.82 MB

28ENV PATH=/bwa/bwa-0.7.17:/minimap2-2.17_x64-linux:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

29/bin/sh -c pip3 install pandas74.39 MB

30/bin/sh -c mkdir /data93 B

31WORKDIR /data0 B

Command

ADD file:c3e6bb316dfa6b81dd4478aaa310df532883b1c0a14edeec3f63d641980c1789 in /